STRINGSTRING
Solyc08g066950.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g066950.2.1" - Uncharacterized protein in Solanum lycopersicum
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g066950.2.1Uncharacterized protein (709 aa)    
Predicted Functional Partners:
DXR
1-deoxy-D-xylulose-5-phosphate reductoisomerase (475 aa)
 
 
  0.978
dxs
1-D-deoxyxylulose 5-phosphate synthase (719 aa)
   
   
0.807
Solyc11g010850.1.1
1-deoxy-D-xylulose 5-phosphate synthase 2 (714 aa)
   
   
 
0.804
LOC543704
GcpE (740 aa)
 
   
  0.709
Solyc08g081570.2.1
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (256 aa)
 
     
  0.634
Solyc11g013090.1.1
Uncharacterized protein (547 aa)
     
 
  0.612
Solyc00g066150.1.1
Annotation not available (369 aa)
     
 
  0.612
Solyc05g012090.2.1
Dihydropterin pyrophosphokinase-dihydropteroate synthase (512 aa)
   
   
  0.607
Solyc01g109300.2.1
ISPH protein (461 aa)
 
   
  0.607
ISPE
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic/chromoplastic ; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol (400 aa)
   
   
  0.597
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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