STRINGSTRING
DCL3 protein (Solanum lycopersicum) - STRING interaction network
"DCL3" - Endoribonuclease Dicer homolog 3a in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCL3Endoribonuclease Dicer homolog 3a (1430 aa)    
Predicted Functional Partners:
AGO7
Argonaute 7 (1000 aa)
     
  0.954
AGO10
Protein argonaute 10 (933 aa)
     
  0.932
AGO6
Argonaute 6 (903 aa)
     
  0.932
AGO3
Argonaute 3 (999 aa)
     
  0.932
AGO5
Argonaute 5 (1011 aa)
     
  0.927
DCL
Protein DCL, chloroplastic ; Has a function in the early stage of chloroplast development and palisade cell morphogenesis (224 aa)
           
  0.904
AGO1-1
Argonaute 1 (1054 aa)
     
  0.871
AGO1B
Argonaute 1 (980 aa)
     
  0.871
Solyc02g069270.2.1
Uncharacterized protein (977 aa)
     
  0.866
AGO2A
Argonaute 2A (1042 aa)
     
  0.866
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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