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STRINGSTRING
101244977 protein (Solanum lycopersicum) - STRING interaction network
"101244977" - DNAse I-like superfamily protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101244977DNAse I-like superfamily protein (873 aa)    
Predicted Functional Partners:
CNOT1
Uncharacterized protein; Transcription regulators (2411 aa)
     
 
  0.848
101245924
Uncharacterized protein; Transcription regulator NOT2/NOT3/NOT5 family protein (848 aa)
       
 
  0.791
101258962
Uncharacterized protein; PLANT HOMOLOGOUS TO PARAFIBROMIN (393 aa)
     
 
  0.690
101268737
annotation not available (285 aa)
     
 
  0.646
101256741
annotation not available (274 aa)
     
 
  0.646
101258270
annotation not available (264 aa)
     
 
  0.646
Solyc06g068410.2.1
annotation not available (252 aa)
     
 
  0.646
101244756
annotation not available (274 aa)
     
 
  0.646
101248130
annotation not available (275 aa)
     
 
  0.646
101248416
annotation not available (274 aa)
     
 
  0.646
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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