STRINGSTRING
Solyc08g067620.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g067620.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g067620.2.1Uncharacterized protein (1453 aa)    
Predicted Functional Partners:
Solyc12g013630.1.1
Uncharacterized protein (628 aa)
   
0.856
Solyc09g091660.2.1
Uncharacterized protein (1440 aa)
   
0.837
Solyc11g007000.1.1
Uncharacterized protein (475 aa)
       
    0.763
Solyc12g017380.1.1
Uncharacterized protein (445 aa)
   
 
  0.741
Solyc10g074850.1.1
Uncharacterized protein (279 aa)
   
 
  0.741
Solyc08g081090.1.1
Uncharacterized protein (516 aa)
   
 
  0.741
Solyc07g063930.2.1
Uncharacterized protein (422 aa)
   
 
  0.741
Solyc05g053860.2.1
Uncharacterized protein (479 aa)
   
 
  0.741
Solyc10g049480.1.1
Uncharacterized protein (461 aa)
   
  0.738
Solyc12g057010.1.1
Uncharacterized protein (520 aa)
   
 
  0.734
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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