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Solyc08g067930.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g067930.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g067930.2.1Uncharacterized protein; ArfGap/RecO-like zinc finger domain-containing protein (643 aa)    
Predicted Functional Partners:
101261389
Uncharacterized protein; Copper ion binding (114 aa)
           
  0.656
101246491
FG-GAP repeat-containing protein (697 aa)
     
   
  0.601
101260909
Actin-related protein 4; Belongs to the actin family (435 aa)
       
 
  0.586
Solyc07g006250.2.1
Uncharacterized protein; RNA polymerase Rpb7 N-terminal domain-containing protein (102 aa)
           
  0.563
Solyc02g082220.2.1
Sec23/Sec24 protein transport family protein (1030 aa)
     
   
  0.540
101248713
Uncharacterized protein; Calcium exchanger 7; Belongs to the Ca(2+)-cation antiporter (CaCA) (TC 2.A.19) family (568 aa)
     
   
  0.522
Solyc07g045380.2.1
Uncharacterized protein; Tetratricopeptide repeat (TPR)-like superfamily protein (568 aa)
       
 
  0.515
Solyc09g031870.2.1
annotation not available (49 aa)
           
  0.509
Solyc07g014650.2.1
ADP-ribosylation factor family protein; Belongs to the small GTPase superfamily. Arf family (169 aa)
           
  0.509
101250125
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles (1701 aa)
       
 
  0.507
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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