STRINGSTRING
Solyc08g067930.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g067930.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g067930.2.1Uncharacterized protein (643 aa)    
Predicted Functional Partners:
Solyc04g082560.2.1
Uncharacterized protein (1228 aa)
     
  0.626
Solyc02g082530.1.1
Uncharacterized protein (97 aa)
     
  0.626
Solyc00g007120.2.1
Annotation not available (750 aa)
     
  0.626
Solyc00g007110.2.1
Annotation not available (447 aa)
     
  0.626
Solyc02g094320.2.1
Uncharacterized protein (389 aa)
     
 
  0.493
Solyc05g013940.2.1
Uncharacterized protein (429 aa)
         
  0.493
Solyc04g024530.2.1
Uncharacterized protein (429 aa)
         
  0.493
Solyc07g045380.2.1
Uncharacterized protein (568 aa)
     
 
    0.443
Solyc06g051310.2.1
Clathrin heavy chain ; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles (1701 aa)
     
 
    0.443
Solyc05g052510.2.1
Clathrin heavy chain ; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles (1706 aa)
     
 
    0.443
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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