STRINGSTRING
Solyc08g067950.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g067950.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g067950.2.1Uncharacterized protein (160 aa)    
Predicted Functional Partners:
Solyc00g026870.1.1
Annotation not available (465 aa)
     
  0.999
rps3
30S ribosomal protein S3, chloroplastic (352 aa)
   
  0.999
Solyc11g021130.1.1
Ribosomal protein S7 (285 aa)
   
  0.998
Solyc11g071320.1.1
Uncharacterized protein (146 aa)
     
  0.997
Solyc11g068820.1.1
Uncharacterized protein (206 aa)
     
  0.997
Solyc08g068220.2.1
Uncharacterized protein (146 aa)
     
  0.997
Solyc11g071530.1.1
Uncharacterized protein (205 aa)
   
  0.996
Solyc09g010030.1.1
Uncharacterized protein (194 aa)
   
  0.996
Solyc02g092300.1.1
Uncharacterized protein (166 aa)
   
  0.996
Solyc02g088760.2.1
Uncharacterized protein (219 aa)
   
  0.996
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (15%) [HD]