STRINGSTRING
Solyc08g068310.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g068310.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g068310.2.1Uncharacterized protein (477 aa)    
Predicted Functional Partners:
Solyc12g006550.1.1
Uncharacterized protein (329 aa)
     
      0.955
Solyc12g038980.1.1
Uncharacterized protein (155 aa)
     
 
  0.951
Solyc11g066630.1.1
Uncharacterized protein (145 aa)
     
      0.950
Solyc06g074720.2.1
Uncharacterized protein (219 aa)
     
      0.950
Solyc02g083470.2.1
Uncharacterized protein (768 aa)
     
      0.948
Solyc10g083600.1.1
Uncharacterized protein (337 aa)
     
      0.948
Solyc09g061430.2.1
Putative nuclear GTPase (609 aa)
     
        0.948
Solyc07g047670.2.1
Pescadillo homolog ; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (603 aa)
     
        0.948
Solyc07g041020.2.1
Uncharacterized protein (313 aa)
     
        0.948
Solyc06g084270.2.1
Uncharacterized protein (370 aa)
     
        0.948
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (7%) [HD]