Known metabolic pathways, protein complexes, signal transduction pathways, etc ... from curated databases.
Genes that are sometimes fused into single open reading frames.
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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
colored nodes: query proteins and first shell of interactors
white nodes: second shell of interactors
empty nodes: proteins of unknown 3D structure
filled nodes: some 3D structure is known or predicted
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
from curated databases
La protein 1 (477 aa)
Predicted Functional Partners:
Protein WUSCHEL; Transcription factor that plays a central role during developmental processes such as early embryogenesis and flowering, probably by regulating expression of specific genes. Required to specify stem cell identity in meristems, such as shoot apical meristem (SAM). May induce shoot stem cells activity in order to maintain the stem cell identity (By similarity) (272 aa)
annotation not available (314 aa)
Uncharacterized protein; Homologue of NAP57 (597 aa)
Ribosomal RNA processing Brix domain protein (337 aa)
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly (329 aa)
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (603 aa)
Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (155 aa)
annotation not available (227 aa)
annotation not available (206 aa)
annotation not available (249 aa)
Your Current Organism:
NCBI taxonomy Id: 4081 Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato