STRINGSTRING
Solyc08g068590.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g068590.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g068590.2.1Uncharacterized protein (274 aa)    
Predicted Functional Partners:
Solyc04g009420.2.1
Uncharacterized protein (244 aa)
   
          0.481
Solyc02g014150.2.1
Uncharacterized protein (377 aa)
   
        0.471
Solyc01g095000.2.1
Uncharacterized protein (245 aa)
   
          0.442
Solyc02g066920.2.1
Uncharacterized protein (154 aa)
   
          0.425
Solyc04g007110.2.1
Uncharacterized protein (340 aa)
   
        0.408
Solyc08g075100.2.1
Uncharacterized protein (356 aa)
   
          0.404
HrBP1
Harpin binding protein 1 (276 aa)
   
     
  0.402
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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