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STRINGSTRING
Solyc08g074230.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g074230.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g074230.1.1annotation not available (271 aa)    
Predicted Functional Partners:
Solyc06g065920.2.1
Protein phosphatase 2C family protein (374 aa)
     
 
  0.642
101265334
Protein serine/threonine phosphatases;protein kinases;catalytics;cAMP-dependent protein kinase regulators;ATP binding;protein serine/threonine phosphatases (1080 aa)
     
 
0.526
101267244
annotation not available (581 aa)
     
 
  0.474
Solyc05g045950.1.1
annotation not available (178 aa)
     
 
  0.474
101259540
ARM repeat superfamily protein (587 aa)
     
 
  0.474
Solyc04g007100.2.1
annotation not available (525 aa)
     
 
  0.474
Solyc03g013140.1.1
annotation not available (163 aa)
           
  0.451
101264465
Protein phosphatase 2C family protein (427 aa)
           
  0.433
LOC543920
Cystathionine gamma synthase (540 aa)
     
   
  0.401
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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