STRINGSTRING
Solyc08g074280.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g074280.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g074280.2.1Uncharacterized protein (956 aa)    
Predicted Functional Partners:
Solyc00g030210.1.1
Annotation not available (1147 aa)
   
  0.828
Solyc03g083440.2.1
Uncharacterized protein (2226 aa)
   
   
  0.744
Solyc03g111140.2.1
Malate synthase (571 aa)
       
      0.700
Solyc03g111130.1.1
Malate synthase (550 aa)
       
      0.700
Solyc03g111120.2.1
Uncharacterized protein (244 aa)
       
      0.700
Solyc07g055850.2.1
Uncharacterized protein (323 aa)
   
  0.698
Solyc03g118240.2.1
Uncharacterized protein (327 aa)
   
  0.698
Solyc12g019010.1.1
Uncharacterized protein (256 aa)
   
 
  0.662
Solyc07g007310.2.1
Uncharacterized protein (341 aa)
   
 
  0.662
Solyc07g007300.2.1
Uncharacterized protein (339 aa)
   
 
  0.662
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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