STRINGSTRING
Solyc08g074360.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g074360.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g074360.2.1Uncharacterized protein (258 aa)    
Predicted Functional Partners:
Solyc08g082840.1.1
Uncharacterized protein (448 aa)
 
 
  0.970
Solyc04g017700.2.1
Uncharacterized protein (735 aa)
     
 
  0.943
Solyc00g127870.2.1
Annotation not available (168 aa)
         
  0.935
Solyc08g076810.2.1
Uncharacterized protein (464 aa)
     
 
  0.932
Solyc08g005210.2.1
Uncharacterized protein (80 aa)
         
  0.929
Solyc06g066400.2.1
Uncharacterized protein (80 aa)
         
  0.929
Solyc02g081610.1.1
Uncharacterized protein (303 aa)
         
  0.928
Solyc00g007090.2.1
Annotation not available (184 aa)
         
  0.906
Solyc11g017400.1.1
Uncharacterized protein (258 aa)
   
   
 
0.801
Solyc10g085100.1.1
Uncharacterized protein (504 aa)
   
 
  0.657
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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