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STRINGSTRING
101244106 protein (Solanum lycopersicum) - STRING interaction network
"101244106" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101244106annotation not available (676 aa)    
Predicted Functional Partners:
101263723
Uncharacterized protein; methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative; Belongs to the class-I aminoacyl-tRNA synthetase family (812 aa)
     
 
  0.983
101257430
annotation not available (738 aa)
     
 
  0.957
101268375
annotation not available (621 aa)
     
 
  0.957
101253854
Uncharacterized protein; tRNA synthetase class I (I, L, M and V) family protein; Belongs to the class-I aminoacyl-tRNA synthetase family (1182 aa)
     
 
  0.950
Solyc01g008310.2.1
tRNA synthetase beta subunit family protein (576 aa)
   
 
  0.938
101244561
Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction- alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain; Belongs to the class-II aminoacyl-tRNA synthetase family (1010 aa)
     
 
  0.920
101251229
Probable alanine--tRNA ligase, chloroplastic; Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction- alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain; Belongs to the class-II aminoacyl-tRNA synthetase family (987 aa)
     
 
  0.920
101244420
Uncharacterized protein; Glutamyl/glutaminyl-tRNA synthetase, class Ic; Belongs to the class-I aminoacyl-tRNA synthetase family (740 aa)
   
 
  0.906
Solyc02g069140.1.1
annotation not available (1041 aa)
   
 
  0.894
LARS
annotation not available (1079 aa)
   
 
  0.894
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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