STRINGSTRING
Solyc08g074730.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g074730.1.1" - Poly [ADP-ribose] polymerase in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g074730.1.1Poly [ADP-ribose] polymerase (621 aa)    
Predicted Functional Partners:
Solyc07g005880.2.1
Uncharacterized protein (1012 aa)
     
  0.918
Solyc02g091120.2.1
DNA ligase (1473 aa)
     
 
  0.905
RPA32b
RPA32b (280 aa)
     
  0.840
RPA32a
RPA32a (272 aa)
     
  0.840
Solyc12g096610.1.1
Uncharacterized protein (251 aa)
       
  0.821
Solyc12g096600.1.1
Uncharacterized protein (180 aa)
       
  0.821
Solyc12g017920.1.1
Uncharacterized protein (587 aa)
       
  0.821
Solyc11g012820.1.1
Uncharacterized protein (339 aa)
     
  0.788
Solyc03g111680.2.1
Uncharacterized protein (1020 aa)
     
    0.787
Solyc02g072090.1.1
Uncharacterized protein (1213 aa)
     
    0.787
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (17%) [HD]