STRINGSTRING
Solyc08g075400.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g075400.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g075400.2.1Uncharacterized protein (124 aa)    
Predicted Functional Partners:
Solyc01g087500.2.1
DNA topoisomerase 2 ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1478 aa)
     
  0.941
Solyc11g013430.1.1
Uncharacterized protein (150 aa)
     
  0.819
Solyc11g013410.1.1
Uncharacterized protein (94 aa)
     
  0.819
Solyc11g013400.1.1
Uncharacterized protein (209 aa)
     
  0.819
Solyc06g060120.2.1
Uncharacterized protein (791 aa)
     
  0.809
Solyc04g082760.2.1
Uncharacterized protein (489 aa)
     
  0.809
Solyc03g097450.2.1
Uncharacterized protein (573 aa)
     
  0.809
Solyc01g109510.2.1
Uncharacterized protein (945 aa)
     
  0.809
Solyc12g056490.1.1
Uncharacterized protein (481 aa)
     
    0.677
ccs52A
Protein FIZZY-RELATED 2 (481 aa)
     
    0.677
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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