STRINGSTRING
Solyc08g075670.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g075670.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g075670.1.1Uncharacterized protein (500 aa)    
Predicted Functional Partners:
Solyc03g083440.2.1
Uncharacterized protein (2226 aa)
     
        0.740
Solyc03g063560.2.1
Uncharacterized protein (1621 aa)
     
        0.719
Solyc12g099790.1.1
Uncharacterized protein (535 aa)
     
   
  0.400
Solyc11g064900.1.1
Uncharacterized protein (529 aa)
     
   
  0.400
Solyc11g006370.1.1
Uncharacterized protein (578 aa)
     
   
  0.400
Solyc10g074570.1.1
Uncharacterized protein (557 aa)
     
   
  0.400
Solyc08g008170.2.1
Uncharacterized protein (516 aa)
     
   
  0.400
CDPK2
Calcium dependent protein kinase (581 aa)
     
   
  0.400
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (8%) [HD]