STRINGSTRING
Solyc08g076120.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g076120.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g076120.2.1Uncharacterized protein (70 aa)    
Predicted Functional Partners:
Solyc09g074400.2.1
Probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog ; Essential component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery. Required for the maturation of extramitochondrial Fe/S proteins (351 aa)
        
  0.962
Solyc09g009410.2.1
Uncharacterized protein (348 aa)
        
  0.962
Solyc03g121030.1.1
Uncharacterized protein (1140 aa)
        
  0.959
Solyc08g065990.2.1
Uncharacterized protein (472 aa)
      
  0.948
NBP35
Cytosolic Fe-S cluster assembly factor NBP35 ; Component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery. Required for maturation of extramitochondrial Fe-S proteins. Functions as Fe-S scaffold, mediating the de novo assembly of an Fe-S cluster and its transfer to target apoproteins. Essential for embryo development (353 aa)
      
  0.496
Solyc12g007010.1.1
Uncharacterized protein (535 aa)
      
  0.496
Solyc06g083990.2.1
Uncharacterized protein (296 aa)
      
  0.496
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (7%) [HD]
STRING is part of the ELIXIR infrastructure: it is one of ELIXIR's Core Data Resources.  Learn more >