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Solyc08g076150.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g076150.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g076150.2.1Uncharacterized protein; Tetratricopeptide repeat (TPR)-like superfamily protein (461 aa)    
Predicted Functional Partners:
Solyc02g090020.2.1
Unknown protein; LOCATED IN- chloroplast; EXPRESSED IN- 22 plant structures; EXPRESSED DURING- 13 growth stages; BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT1G54680.3); Has 30201 Blast hits to 17322 proteins in 780 species- A /.../- 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source- NCBI BLink) (248 aa)
     
   
  0.853
101257518
Dicarboxylate diiron protein, putative (Crd1) (404 aa)
     
        0.732
101252151
Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated (260 aa)
     
   
  0.642
101264926
Unknown protein; CONTAINS InterPro DOMAIN/s- Uncharacterised protein family UPF0307 (InterPro-IPR006839); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; /.../ Eukaryotes - 2996 (source- NCBI BLink) (298 aa)
           
  0.633
101257127
Uncharacterized protein; Tetratricopeptide repeat (TPR)-like superfamily protein (492 aa)
           
  0.581
Solyc01g081320.2.1
Uncharacterized protein; Tetratricopeptide repeat (TPR)-like superfamily protein (518 aa)
           
  0.581
101248713
Uncharacterized protein; Calcium exchanger 7; Belongs to the Ca(2+)-cation antiporter (CaCA) (TC 2.A.19) family (568 aa)
           
  0.571
101267069
annotation not available (141 aa)
           
  0.555
Solyc06g083490.2.1
annotation not available (185 aa)
           
  0.447
Solyc06g083480.2.1
annotation not available (129 aa)
           
  0.447
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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