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STRINGSTRING
Solyc08g076340.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g076340.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g076340.2.1annotation not available (62 aa)    
Predicted Functional Partners:
Solyc06g008170.2.1
Ribosomal protein L17 (140 aa)
     
 
  0.997
DDTFR19
60S ribosomal protein L29; Ripening regulated protein DDTFR19 ; Belongs to the eukaryotic ribosomal protein eL29 family (60 aa)
     
 
  0.994
101245201
Ribosomal protein L17 ; Belongs to the universal ribosomal protein uL14 family (140 aa)
     
 
  0.992
Solyc09g072870.2.1
Ribosomal protein L17 (140 aa)
     
 
  0.992
l17
Ribosomal protein L17 (140 aa)
     
 
  0.992
101268656
annotation not available (143 aa)
     
 
  0.991
101249905
annotation not available (143 aa)
     
 
  0.991
101253268
annotation not available (180 aa)
     
 
  0.991
101253133
annotation not available (182 aa)
     
 
  0.991
101262068
annotation not available (144 aa)
     
 
  0.991
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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