STRINGSTRING
TMT protein (Solanum lycopersicum) - STRING interaction network
"TMT" - Gamma-tocopherol methyltransferase in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMTGamma-tocopherol methyltransferase (369 aa)    
Predicted Functional Partners:
Solyc08g068570.2.1
Uncharacterized protein (498 aa)
 
 
  0.974
CYP51
Obtusifoliol 14alpha-demethylase (487 aa)
     
 
  0.846
Solyc04g077150.2.1
Uncharacterized protein (129 aa)
       
 
  0.813
Solyc02g086190.1.1
Uncharacterized protein (257 aa)
     
 
  0.783
Solyc02g086180.2.1
Uncharacterized protein (271 aa)
     
 
  0.783
Solyc02g063240.2.1
Uncharacterized protein (271 aa)
     
 
  0.783
FK
Delta14-sterol reductase (369 aa)
     
 
  0.758
Solyc06g074090.2.1
Uncharacterized protein (434 aa)
     
 
  0.758
Solyc01g009310.2.1
Uncharacterized protein (434 aa)
     
 
  0.758
Solyc08g079570.2.1
Uncharacterized protein (296 aa)
     
 
  0.745
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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