STRINGSTRING
Solyc08g076490.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g076490.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g076490.2.1Uncharacterized protein (377 aa)    
Predicted Functional Partners:
Solyc00g101700.1.1
Annotation not available (162 aa)
     
  0.845
MKK3
MAPKK (354 aa)
   
0.804
mek1
MAP kinase kinase (357 aa)
   
0.803
MKK2
MAPKK (359 aa)
   
0.799
MKK4
MAPKK (335 aa)
   
0.796
Solyc03g019850.2.1
Uncharacterized protein (515 aa)
   
0.793
Solyc12g005840.1.1
Uncharacterized protein (300 aa)
       
  0.784
Solyc10g006380.1.1
Uncharacterized protein (267 aa)
       
  0.784
Solyc07g064290.2.1
Uncharacterized protein (377 aa)
       
  0.784
Solyc07g052410.2.1
Uncharacterized protein (257 aa)
       
  0.784
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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