STRINGSTRING
Solyc08g076840.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g076840.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g076840.2.1Uncharacterized protein (285 aa)    
Predicted Functional Partners:
Solyc01g109660.2.1
Glycine-rich protein (175 aa)
   
          0.526
Solyc10g084630.1.1
Uncharacterized protein (138 aa)
   
          0.524
Solyc09g011210.2.1
Uncharacterized protein (132 aa)
   
          0.524
Solyc04g074310.2.1
Uncharacterized protein (293 aa)
   
          0.504
Solyc11g044470.1.1
Uncharacterized protein (261 aa)
   
          0.501
Solyc06g054380.2.1
Uncharacterized protein (168 aa)
   
          0.501
Solyc04g049920.2.1
Uncharacterized protein (241 aa)
   
          0.497
Solyc04g005350.2.1
Uncharacterized protein (167 aa)
   
          0.469
Solyc03g033310.2.1
Uncharacterized protein (221 aa)
   
          0.462
Solyc06g035610.2.1
Uncharacterized protein (144 aa)
   
          0.460
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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