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STRINGSTRING
Solyc08g076980.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g076980.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g076980.2.1annotation not available (428 aa)    
Predicted Functional Partners:
ASS
Arginosuccinate synthase family (494 aa)
   
  0.964
101245573
Uncharacterized protein; HOPW1-1-interacting 1; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family (460 aa)
       
  0.957
101246902
annotation not available (379 aa)
       
  0.931
OTC
annotation not available (374 aa)
       
  0.931
ARG2
Arginase 2 ; Belongs to the arginase family (338 aa)
         
  0.928
ARG1
Arginase 1 ; Belongs to the arginase family (338 aa)
         
  0.928
101265059
Arginine biosynthesis bifunctional protein ArgJ, chloroplastic; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis- the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate (470 aa)
     
 
  0.909
NOS1
Uncharacterized protein; Nitric oxide synthase (560 aa)
         
    0.900
Solyc11g012970.1.1
annotation not available (308 aa)
         
  0.801
ctd3
Aminoacylase-1 (448 aa)
         
  0.801
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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