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Solyc08g077140.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g077140.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g077140.1.1Uncharacterized protein; Pentatricopeptide (PPR) repeat-containing protein (270 aa)    
Predicted Functional Partners:
101263810
Uncharacterized protein; Fructokinase-like 2 (645 aa)
     
        0.863
101258591
annotation not available (408 aa)
     
   
0.857
101264082
annotation not available (689 aa)
     
   
0.857
101259968
Uncharacterized protein; Fructokinase-like 1 (478 aa)
     
        0.857
101055518
Hop-interacting protein THI030 (528 aa)
     
        0.856
101254024
Antitermination NusB domain-containing protein (291 aa)
     
        0.856
101258281
Lojap-related protein (233 aa)
     
        0.853
101257440
Uncharacterized protein; Pentatricopeptide repeat (PPR) superfamily protein (305 aa)
     
        0.848
101263737
Uncharacterized protein; DEAD box RNA helicase (RH3) (746 aa)
     
      0.766
CIP5
CONSTANS interacting protein 5 (683 aa)
     
        0.759
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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