STRINGSTRING
Solyc08g077260.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g077260.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g077260.2.1Uncharacterized protein (138 aa)    
Predicted Functional Partners:
Solyc11g013550.1.1
Uncharacterized protein (136 aa)
     
 
  0.934
atg6
Hop-interacting protein THI040 (523 aa)
       
      0.506
Solyc09g061620.2.1
Uncharacterized protein (220 aa)
     
   
  0.479
Solyc06g083530.2.1
Uncharacterized protein (220 aa)
     
   
  0.479
Solyc02g069150.2.1
Uncharacterized protein (222 aa)
     
   
  0.479
Solyc12g096700.1.1
Uncharacterized protein (194 aa)
           
  0.410
Solyc08g014550.2.1
Uncharacterized protein (194 aa)
           
  0.410
Solyc06g043030.2.1
Uncharacterized protein (1138 aa)
       
      0.410
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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