STRINGSTRING
Solyc08g077270.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g077270.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g077270.2.1Uncharacterized protein (558 aa)    
Predicted Functional Partners:
Solyc02g068530.2.1
Uncharacterized protein (485 aa)
   
  0.966
Solyc09g009780.2.1
Uncharacterized protein (164 aa)
   
 
  0.952
pcna
Proliferating cell nuclear antigen ; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (264 aa)
   
 
  0.907
Solyc03g118320.1.1
Uncharacterized protein (583 aa)
     
      0.903
Solyc05g012090.2.1
Dihydropterin pyrophosphokinase-dihydropteroate synthase (512 aa)
   
 
  0.781
Solyc03g098140.2.1
Uncharacterized protein (343 aa)
       
  0.744
Solyc02g079100.2.1
Uncharacterized protein (385 aa)
     
  0.703
Solyc11g009020.1.1
Uncharacterized protein (302 aa)
     
  0.698
Solyc10g054280.1.1
Uncharacterized protein (246 aa)
     
  0.698
Solyc08g081030.1.1
Uncharacterized protein (380 aa)
     
  0.698
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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