STRINGSTRING
Solyc08g077410.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g077410.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g077410.2.1Uncharacterized protein (114 aa)    
Predicted Functional Partners:
Solyc12g042900.1.1
Uncharacterized protein (172 aa)
     
  0.988
Solyc06g067940.2.1
Uncharacterized protein (177 aa)
     
  0.988
atpB
ATP synthase subunit beta, chloroplastic ; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits (609 aa)
     
   
  0.909
Solyc03g043850.2.1
Uncharacterized protein (89 aa)
     
  0.863
Solyc02g091880.2.1
Uncharacterized protein (100 aa)
     
  0.863
Solyc08g067020.2.1
Cytochrome b-c1 complex subunit 7 ; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain (123 aa)
     
 
  0.859
Solyc00g042130.1.1
Annotation not available (704 aa)
     
 
  0.856
Solyc11g072450.1.1
Uncharacterized protein (168 aa)
     
   
  0.805
Solyc06g005020.1.1
Uncharacterized protein (143 aa)
     
   
  0.805
Solyc06g005010.1.1
Uncharacterized protein (86 aa)
     
   
  0.805
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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