• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc08g077410.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g077410.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g077410.2.1Uncharacterized protein; Cytochrome c oxidase, subunit Vib family protein (114 aa)    
Predicted Functional Partners:
101264898
annotation not available (89 aa)
     
 
  0.989
101247875
annotation not available (100 aa)
     
 
  0.989
101262088
annotation not available (172 aa)
     
 
  0.987
Solyc06g067940.2.1
annotation not available (177 aa)
     
 
  0.987
101243864
Cytochrome b6-f complex iron-sulfur subunit; Photosynthetic electron transfer C (231 aa)
     
 
  0.982
Solyc11g039840.1.1
Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis (265 aa)
     
 
  0.982
101262441
Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain (123 aa)
     
 
  0.977
101263000
annotation not available (324 aa)
     
 
  0.965
101267818
annotation not available (320 aa)
     
 
  0.965
Solyc02g093900.2.1
annotation not available (269 aa)
     
 
  0.965
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (7%) [HD]