STRINGSTRING
Solyc08g077720.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g077720.2.1" - Annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g077720.2.1Annotation not available (92 aa)    
Predicted Functional Partners:
rps3
30S ribosomal protein S3, chloroplastic (352 aa)
     
  0.999
Solyc11g021130.1.1
Ribosomal protein S7 (285 aa)
     
  0.999
Solyc10g080590.1.1
Uncharacterized protein (164 aa)
   
  0.998
Solyc10g078960.1.1
Uncharacterized protein (164 aa)
   
  0.998
Solyc11g071490.1.1
Uncharacterized protein (112 aa)
     
  0.998
Solyc04g072660.2.1
Uncharacterized protein (113 aa)
     
  0.998
Solyc01g009100.2.1
Uncharacterized protein (112 aa)
     
  0.998
Solyc12g008720.1.1
Uncharacterized protein (120 aa)
     
  0.998
Solyc05g008010.2.1
Uncharacterized protein (120 aa)
     
  0.998
Solyc08g006900.2.1
Uncharacterized protein (133 aa)
     
  0.997
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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