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STRINGSTRING
Solyc08g077720.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g077720.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g077720.2.1annotation not available (92 aa)    
Predicted Functional Partners:
101262068
annotation not available (144 aa)
   
 
  0.993
RPS17
40S ribosomal protein S17 ; Belongs to the eukaryotic ribosomal protein eS17 family (144 aa)
   
 
  0.993
DDTFR19
60S ribosomal protein L29; Ripening regulated protein DDTFR19 ; Belongs to the eukaryotic ribosomal protein eL29 family (60 aa)
     
 
  0.991
101265689
annotation not available (164 aa)
   
 
  0.990
101257121
annotation not available (164 aa)
   
 
  0.990
101247355
annotation not available (86 aa)
     
 
  0.989
Solyc01g008080.2.1
annotation not available (86 aa)
     
 
  0.989
101265312
annotation not available (120 aa)
     
 
  0.989
101251086
annotation not available (120 aa)
     
 
  0.989
101244617
annotation not available (133 aa)
   
 
  0.989
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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