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STRINGSTRING
101248227 protein (Solanum lycopersicum) - STRING interaction network
"101248227" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101248227annotation not available (266 aa)    
Predicted Functional Partners:
101262299
Uncharacterized protein; Geranylgeranyl reductase (464 aa)
     
 
  0.825
101267560
Protein kinases;ubiquitin-protein ligases (1633 aa)
     
   
  0.752
101268560
Uncharacterized protein; Calcium sensing receptor (392 aa)
     
   
  0.732
Solyc09g014760.2.1
UbiA prenyltransferase family protein (408 aa)
     
   
  0.708
104649487
Ankyrin repeat family protein (172 aa)
     
        0.698
101262449
One helix protein (112 aa)
     
   
  0.684
101266527
Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated (286 aa)
     
   
  0.665
101266787
Uncharacterized protein; NagB/RpiA/CoA transferase-like superfamily protein (296 aa)
     
   
  0.602
101266160
annotation not available (451 aa)
     
 
  0.590
101256723
PsbP-like protein 2 (227 aa)
     
   
  0.589
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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