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STRINGSTRING
101265568 protein (Solanum lycopersicum) - STRING interaction network
"101265568" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101265568annotation not available (221 aa)    
Predicted Functional Partners:
101267826
annotation not available (440 aa)
           
  0.851
101257018
Uncharacterized protein; TRICHOME BIREFRINGENCE-LIKE 13 (407 aa)
           
  0.851
101259585
Plant protein of unknown function (DUF828) (398 aa)
           
  0.851
101248296
Unknown protein; Has 54 Blast hits to 54 proteins in 19 species- Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 6; Plants - 34; Viruses - 0; Other Eukaryotes - 3 (source- NCBI BLink) (202 aa)
       
      0.766
Solyc05g007200.2.1
Uncharacterized protein; RNA-binding (RRM/RBD/RNP motifs) family protein (305 aa)
       
      0.766
101244651
PRA1 family protein; May be involved in both secretory and endocytic intracellular trafficking in the endosomal/prevacuolar compartments (182 aa)
       
      0.766
101255703
annotation not available (409 aa)
       
      0.706
101253933
annotation not available (464 aa)
           
  0.650
101251789
annotation not available (449 aa)
           
  0.650
Solyc03g071650.1.1
annotation not available (175 aa)
           
  0.650
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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