STRINGSTRING
Solyc08g078460.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g078460.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g078460.2.1Uncharacterized protein (375 aa)    
Predicted Functional Partners:
Solyc07g014640.2.1
Uncharacterized protein (444 aa)
   
 
  0.744
Solyc09g031880.1.1
Uncharacterized protein (376 aa)
   
 
  0.740
Solyc07g016170.2.1
Uncharacterized protein (980 aa)
   
 
  0.740
Solyc01g058390.2.1
Uncharacterized protein (500 aa)
   
 
  0.740
Solyc00g011890.2.1
Annotation not available (1036 aa)
   
 
  0.740
Solyc06g035680.1.1
Uncharacterized protein (178 aa)
   
 
  0.610
SDH
Sorbitol related enzyme (355 aa)
   
 
  0.610
Solyc03g118640.2.1
Uncharacterized protein (1343 aa)
         
  0.601
Solyc11g006340.1.1
Uncharacterized protein (632 aa)
         
  0.539
Solyc03g083440.2.1
Uncharacterized protein (2226 aa)
         
  0.473
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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