STRINGSTRING
Solyc08g079440.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g079440.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g079440.1.1Uncharacterized protein (445 aa)    
Predicted Functional Partners:
Solyc06g069550.1.1
UDP-glucose 6-dehydrogenase (480 aa)
   
 
  0.959
Solyc03g115380.1.1
UDP-glucose 6-dehydrogenase (480 aa)
   
 
  0.959
Solyc02g088690.2.1
UDP-glucose 6-dehydrogenase (316 aa)
   
 
  0.959
Solyc02g067080.2.1
UDP-glucose 6-dehydrogenase (509 aa)
   
 
  0.959
Solyc03g078810.2.1
Uncharacterized protein (457 aa)
       
  0.910
Solyc04g058070.2.1
Uncharacterized protein (617 aa)
         
  0.900
Solyc12g099480.1.1
Uncharacterized protein (394 aa)
         
 
0.900
Solyc12g010200.1.1
Hexosyltransferase (593 aa)
         
    0.900
Solyc11g066720.1.1
Uncharacterized protein (386 aa)
         
    0.900
Solyc11g066150.1.1
Uncharacterized protein (346 aa)
         
 
0.900
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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