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STRINGSTRING
Solyc08g079940.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g079940.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g079940.1.1annotation not available (196 aa)    
Predicted Functional Partners:
Solyc01g087830.1.1
annotation not available (249 aa)
   
          0.447
Solyc10g085520.1.1
annotation not available (140 aa)
   
          0.446
Solyc08g079950.1.1
annotation not available (163 aa)
 
          0.446
Solyc08g014530.1.1
annotation not available (253 aa)
   
          0.444
Solyc08g007660.2.1
annotation not available (348 aa)
 
          0.444
Solyc02g072350.1.1
annotation not available (399 aa)
 
          0.444
Solyc07g009210.1.1
annotation not available (171 aa)
   
          0.441
Solyc08g079960.1.1
annotation not available (255 aa)
 
          0.440
Solyc12g088770.1.1
annotation not available (122 aa)
   
          0.429
101265334
Protein serine/threonine phosphatases;protein kinases;catalytics;cAMP-dependent protein kinase regulators;ATP binding;protein serine/threonine phosphatases (1080 aa)
     
 
  0.428
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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