STRINGSTRING
Solyc08g080040.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g080040.2.1" - Uncharacterized protein in Solanum lycopersicum
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g080040.2.1Uncharacterized protein (418 aa)    
Predicted Functional Partners:
LOC544150
Dihydroflavonol-4-reductase (379 aa)
     
 
  0.623
CHS1
Chalcone synthase 1 ; The primary product of this enzyme is 4,2’,4’,6’- tetrahydroxychalcone (also termed naringenin-chalcone or chalcone) which can under specific conditions spontaneously isomerize into naringenin (389 aa)
   
 
  0.597
CHS2
Chalcone synthase 2 ; The primary product of this enzyme is 4,2’,4’,6’- tetrahydroxychalcone (also termed naringenin-chalcone or chalcone) which can under specific conditions spontaneously isomerize into naringenin (389 aa)
   
 
  0.597
Solyc03g031470.2.1
Uncharacterized protein (334 aa)
     
 
  0.578
AH
Basic helix-loop-helix transcription factor (680 aa)
     
   
  0.569
Solyc12g049300.1.1
Uncharacterized protein (352 aa)
     
 
  0.555
Solyc03g115220.2.1
Uncharacterized protein (514 aa)
   
   
  0.533
Solyc12g006360.1.1
Multidrug and toxic compound extrusion protein (503 aa)
     
   
  0.518
Solyc03g097340.1.1
Uncharacterized protein (342 aa)
           
  0.513
Solyc00g138060.2.1
Annotation not available (311 aa)
   
          0.496
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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