STRINGSTRING
Solyc08g080340.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g080340.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g080340.2.1Uncharacterized protein (463 aa)    
Predicted Functional Partners:
PSD2
Phosphatidylserine decarboxylase proenzyme 2 ; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine (648 aa)
     
  0.947
LOC543838
Phosphatidylserine decarboxylase (445 aa)
     
  0.943
Solyc05g050710.2.1
Uncharacterized protein (416 aa)
         
  0.942
Solyc08g082340.2.1
Uncharacterized protein (371 aa)
     
  0.933
Solyc01g091950.2.1
Uncharacterized protein (548 aa)
     
  0.932
Solyc04g080020.2.1
Uncharacterized protein (393 aa)
         
  0.929
Solyc12g011170.1.1
Phospholipase D ; Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond (848 aa)
         
  0.929
Solyc10g024370.1.1
Phospholipase D ; Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond (839 aa)
         
  0.929
Solyc10g017650.1.1
Uncharacterized protein (1119 aa)
         
  0.929
PLDb1
Phospholipase D ; Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond (846 aa)
         
  0.929
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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