STRINGSTRING
Solyc08g080910.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g080910.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g080910.2.1Uncharacterized protein (250 aa)    
Predicted Functional Partners:
Solyc11g072190.1.1
Uncharacterized protein (227 aa)
     
  0.976
DDTFR10
Ripening regulated protein DDTFR10 (241 aa)
     
  0.976
Solyc01g098000.2.1
Uncharacterized protein (241 aa)
     
  0.976
Solyc07g008950.2.1
Uncharacterized protein (812 aa)
     
  0.946
Solyc12g056240.1.1
Glutathione peroxidase (170 aa)
     
 
  0.939
GPXle-2
Glutathione peroxidase (170 aa)
     
 
  0.939
GPXle-1
Probable phospholipid hydroperoxide glutathione peroxidase ; Protects cells and enzymes from oxidative damage, by catalyzing the reduction of hydrogen peroxide, lipid peroxides and organic hydroperoxide, by glutathione (239 aa)
     
 
  0.939
Solyc08g068800.2.1
Uncharacterized protein (250 aa)
     
 
  0.939
Solyc08g006720.2.1
Glutathione peroxidase (238 aa)
     
 
  0.939
LOC544261
Glutathione peroxidase (167 aa)
     
 
  0.939
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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