STRINGSTRING
Solyc08g081030.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g081030.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g081030.1.1Uncharacterized protein (380 aa)    
Predicted Functional Partners:
Solyc08g077270.2.1
Uncharacterized protein (558 aa)
     
  0.698
Solyc03g083440.2.1
Uncharacterized protein (2226 aa)
     
 
    0.655
Solyc03g063560.2.1
Uncharacterized protein (1621 aa)
     
 
    0.632
Solyc01g103950.2.1
Uncharacterized protein (553 aa)
       
    0.598
Solyc04g005030.2.1
Uncharacterized protein (596 aa)
     
  0.594
Solyc12g099930.1.1
Hop-interacting protein THI032 (401 aa)
   
 
  0.591
Solyc10g079620.1.1
Haloacid dehalogenase (295 aa)
 
 
 
  0.545
Solyc10g054280.1.1
Uncharacterized protein (246 aa)
   
     
  0.515
Solyc09g008130.2.1
Phosphoglycerate kinase (683 aa)
   
      0.507
LOC543811
Transaldolase ToTAL2 (397 aa)
       
  0.503
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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