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STRINGSTRING
101252613 protein (Solanum lycopersicum) - STRING interaction network
"101252613" - RING/U-box superfamily protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101252613RING/U-box superfamily protein (216 aa)    
Predicted Functional Partners:
cul4
Uncharacterized protein; Cullin 4 ; Belongs to the cullin family (785 aa)
     
   
  0.753
Solyc02g091120.2.1
DNA LIGASE 6 (1473 aa)
     
   
  0.703
101248739
annotation not available (802 aa)
     
   
  0.612
Solyc05g056590.2.1
Uncharacterized protein; Regulator of chromosome condensation (RCC1) family protein (275 aa)
       
 
  0.599
101248184
Uncharacterized protein; Clp ATPase; Belongs to the ClpA/ClpB family (964 aa)
     
   
  0.495
101249133
Uncharacterized protein; Galactose oxidase/kelch repeat superfamily protein (438 aa)
           
  0.457
101244941
annotation not available (245 aa)
           
  0.451
Solyc09g090590.2.1
annotation not available (246 aa)
           
  0.451
101257339
annotation not available (221 aa)
           
  0.428
101268051
annotation not available (250 aa)
           
  0.428
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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