STRINGSTRING
Solyc08g081330.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g081330.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g081330.2.1Uncharacterized protein (356 aa)    
Predicted Functional Partners:
Solyc04g077790.2.1
Uncharacterized protein (300 aa)
   
 
0.968
Solyc09g020140.2.1
Uncharacterized protein (267 aa)
   
 
0.956
Solyc09g083340.1.1
Uncharacterized protein (172 aa)
     
      0.902
Solyc09g048970.1.1
Uncharacterized protein (255 aa)
     
      0.902
Solyc06g033910.1.1
Uncharacterized protein (93 aa)
     
      0.902
Solyc06g033900.1.1
Uncharacterized protein (123 aa)
     
      0.902
Solyc06g033890.1.1
Uncharacterized protein (170 aa)
     
      0.902
Solyc06g005790.2.1
Uncharacterized protein (177 aa)
     
      0.902
Solyc03g118380.1.1
Uncharacterized protein (157 aa)
     
      0.902
Solyc09g010500.2.1
Uncharacterized protein (144 aa)
     
      0.866
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (10%) [HD]