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BL3 protein (Solanum lycopersicum) - STRING interaction network
"BL3" - Hop-interacting protein THI035 in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BL3Hop-interacting protein THI035 (644 aa)    
Predicted Functional Partners:
101244955
Uncharacterized protein; Plant-specific transcription factor YABBY family protein (192 aa)
           
  0.838
Solyc03g112740.1.1
annotation not available (184 aa)
       
 
  0.825
101246185
Protein of unknown function (DUF640) (178 aa)
           
  0.733
101258948
Uncharacterized protein; No pollen germination related 1 (706 aa)
           
  0.719
KN1
Homeotic protein knotted-1; Appears to be involved in meristem formation and in the regulation of leaf morphology. Misexpression makes the leaf more compound which is always associated with growth retardation and loss of apical dominance, resulting in dwarfed, bushy plants. Probably binds to the DNA sequence 5’-TGAC-3’ (355 aa)
       
 
0.690
101251019
annotation not available (269 aa)
           
  0.675
Solyc08g007780.2.1
annotation not available (127 aa)
           
  0.675
T6
Homeobox protein knotted-1-like LET6; May have a role to play in formative events in ovule and embryo morphogenesis. Probably binds to the DNA sequence 5’-TGAC- 3’ (354 aa)
       
 
0.672
wus
Protein WUSCHEL; Transcription factor that plays a central role during developmental processes such as early embryogenesis and flowering, probably by regulating expression of specific genes. Required to specify stem cell identity in meristems, such as shoot apical meristem (SAM). May induce shoot stem cells activity in order to maintain the stem cell identity (By similarity) (272 aa)
           
  0.660
101259264
Pathogenesis related homeodomain protein A (707 aa)
     
   
  0.652
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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