STRINGSTRING
Solyc08g081520.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g081520.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g081520.1.1Uncharacterized protein (405 aa)    
Predicted Functional Partners:
Solyc11g006620.1.1
Uncharacterized protein (658 aa)
       
 
  0.641
Solyc10g081940.1.1
Uncharacterized protein (640 aa)
       
 
  0.641
Solyc04g009740.2.1
Uncharacterized protein (651 aa)
       
 
  0.641
Solyc06g005960.2.1
Uncharacterized protein (642 aa)
           
  0.511
Solyc10g080580.1.1
Uncharacterized protein (365 aa)
     
   
  0.491
Solyc10g078940.1.1
Uncharacterized protein (369 aa)
     
   
  0.491
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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