STRINGSTRING
101244893 protein (Solanum lycopersicum) - STRING interaction network
"101244893" - Unknown protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101244893Unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- plasma membrane; BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT5G52870.1); Has 1546 Blast hits to 738 proteins in 1 /.../cies- Archae - 0; Bacteria - 143; Metazoa - 278; Fungi - 131; Plants - 95; Viruses - 4; Other Eukaryotes - 895 (source- NCBI BLink) (453 aa)    
Predicted Functional Partners:
Solyc05g054850.1.1
Unknown protein; BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT2G37380.1); Has 184 Blast hits to 178 proteins in 53 species- Archae - 0; Bacteria - 58; Metazoa - 9; Fungi - 0; Plants - 103; Viruses - 0; Other Eukaryotes - 14 (s /.../ NCBI BLink) (364 aa)
           
  0.929
104649095
Unknown protein; BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT2G39370.1); Has 1284 Blast hits to 422 proteins in 114 species- Archae - 0; Bacteria - 90; Metazoa - 125; Fungi - 151; Plants - 136; Viruses - 0; Other Eukaryotes - /.../source- NCBI BLink) (452 aa)
           
  0.730
101250751
Unknown protein; Has 2862 Blast hits to 2331 proteins in 349 species- Archae - 6; Bacteria - 408; Metazoa - 833; Fungi - 223; Plants - 134; Viruses - 7; Other Eukaryotes - 1251 (source- NCBI BLink) (669 aa)
           
  0.684
101267186
Uncharacterized protein; HOPZ-ACTIVATED RESISTANCE 1; Belongs to the disease resistance NB-LRR family (850 aa)
           
  0.581
101254517
annotation not available (1326 aa)
           
  0.580
101251733
annotation not available (845 aa)
           
  0.574
101248349
annotation not available (1134 aa)
           
  0.549
101259083
annotation not available (263 aa)
           
  0.465
101244605
annotation not available (270 aa)
           
  0.465
101258070
annotation not available (253 aa)
           
  0.465
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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