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STRINGSTRING
Solyc08g082350.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g082350.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g082350.2.1annotation not available (411 aa)    
Predicted Functional Partners:
101261383
Uncharacterized protein; GCR2-like 1 (424 aa)
           
  0.738
Solyc11g016970.1.1
MATE efflux family protein; Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family (472 aa)
           
  0.627
101256512
MATE efflux family protein; Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family (466 aa)
           
  0.627
Solyc07g007480.1.1
MATE efflux family protein (93 aa)
           
  0.627
101268678
MATE efflux family protein; Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family (550 aa)
           
  0.627
101252931
MATE efflux family protein; Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family (608 aa)
           
  0.627
101258407
MATE efflux family protein; Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family (495 aa)
           
  0.627
Solyc00g093100.1.1
MATE efflux family protein (195 aa)
           
  0.627
101260207
MATE efflux family protein; Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family (503 aa)
           
  0.485
101245696
MATE efflux family protein; Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family (525 aa)
           
  0.482
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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