STRINGSTRING
Solyc08g082430.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g082430.2.1" - Nucleoside diphosphate kinase in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g082430.2.1Nucleoside diphosphate kinase (238 aa)    
Predicted Functional Partners:
Solyc02g021060.2.1
Uracil-DNA glycosylase ; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine (320 aa)
       
 
  0.730
Solyc12g099260.1.1
Uncharacterized protein (608 aa)
   
   
  0.665
Solyc01g059880.2.1
Uncharacterized protein (608 aa)
   
   
  0.665
Solyc10g007420.2.1
Uncharacterized protein (425 aa)
   
  0.639
Solyc10g007240.1.1
Uncharacterized protein (594 aa)
   
  0.639
Solyc10g007230.1.1
Uncharacterized protein (596 aa)
   
  0.639
Solyc12g010380.1.1
Uncharacterized protein (606 aa)
     
  0.624
Solyc09g007180.2.1
Uncharacterized protein (281 aa)
     
  0.624
Solyc06g065270.2.1
Uncharacterized protein (286 aa)
     
  0.624
Solyc05g014980.2.1
Uncharacterized protein (242 aa)
     
  0.624
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (14%) [HD]