STRINGSTRING
Solyc08g083260.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g083260.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g083260.2.1Uncharacterized protein (427 aa)    
Predicted Functional Partners:
Solyc09g005010.2.1
Uncharacterized protein (1001 aa)
       
  0.979
Solyc06g052030.2.1
Uncharacterized protein (783 aa)
       
  0.979
Solyc03g082940.2.1
Uncharacterized protein (954 aa)
       
  0.979
Solyc09g064660.2.1
Uncharacterized protein (114 aa)
       
  0.778
Solyc06g084310.2.1
Annotation not available (114 aa)
       
  0.778
Xpo1
Exportin-1 (1075 aa)
       
 
  0.736
Solyc01g098170.2.1
Uncharacterized protein (1199 aa)
       
 
  0.736
Solyc03g117940.2.1
Uncharacterized protein (286 aa)
       
      0.720
Solyc09g072970.2.1
Uncharacterized protein (93 aa)
       
  0.603
Solyc06g084350.2.1
Uncharacterized protein (93 aa)
       
  0.603
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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