STRINGSTRING
Solyc08g083360.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc08g083360.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc08g083360.2.1Uncharacterized protein (192 aa)    
Predicted Functional Partners:
Solyc03g083440.2.1
Uncharacterized protein (2226 aa)
     
  0.928
Solyc01g102490.2.1
Uncharacterized protein (391 aa)
       
  0.867
Solyc07g007450.2.1
Iron-sulfur cluster assembly protein ; Scaffold protein for the de novo synthesis of iron- sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins (164 aa)
   
  0.852
Solyc03g112900.2.1
Iron-sulfur cluster assembly protein ; Scaffold protein for the de novo synthesis of iron- sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins (166 aa)
   
  0.852
Solyc02g091900.2.1
Uncharacterized protein (343 aa)
   
  0.811
Solyc02g087230.2.1
Uncharacterized protein (149 aa)
   
 
  0.778
Solyc11g006920.1.1
Uncharacterized protein (123 aa)
   
 
  0.740
Solyc09g009460.2.1
Uncharacterized protein (137 aa)
   
 
  0.740
Solyc09g009440.1.1
Uncharacterized protein (69 aa)
   
 
  0.740
Solyc05g051700.2.1
Uncharacterized protein (176 aa)
   
 
  0.740
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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