STRINGSTRING
Solyc09g005010.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g005010.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g005010.2.1Uncharacterized protein (1001 aa)    
Predicted Functional Partners:
Solyc08g083260.2.1
Uncharacterized protein (427 aa)
       
  0.979
Solyc10g084270.1.1
Importin subunit alpha (520 aa)
     
  0.975
Solyc08g041890.2.1
Importin subunit alpha (577 aa)
     
  0.975
KAP
Importin subunit alpha ; Binds specifically and directly to substrates containing either a simple or bipartite NLS motif. Promotes docking of import substrates to the nuclear envelope. Seems to act as a cytosolic receptor for both simple and bipartite NLS motifs (By similarity) (527 aa)
     
  0.975
Solyc01g100720.2.1
Importin subunit alpha (534 aa)
     
  0.975
Solyc01g060470.2.1
Importin subunit alpha (530 aa)
     
  0.975
Solyc06g082720.1.1
Uncharacterized protein (203 aa)
     
  0.970
RAN1
GTP-binding nuclear protein Ran1 ; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle (By similarity) (221 aa)
     
  0.970
RAN2
GTP-binding nuclear protein Ran2 ; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle (By similarity) (221 aa)
     
  0.970
Solyc01g104680.2.1
GTP-binding nuclear protein Ran2 (221 aa)
     
  0.970
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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