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Solyc09g005300.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g005300.2.1" - mRNA cap guanine-N7 methyltransferase in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g005300.2.1mRNA cap guanine-N7 methyltransferase (373 aa)    
Predicted Functional Partners:
Solyc12g035870.1.1
Uncharacterized protein (398 aa)
     
  0.844
Solyc11g007700.1.1
Uncharacterized protein (357 aa)
     
 
0.832
Solyc03g118250.2.1
mRNA cap guanine-N7 methyltransferase (373 aa)
         
 
0.800
Solyc09g011930.2.1
Uncharacterized protein (677 aa)
     
  0.747
Solyc11g040180.1.1
Uncharacterized protein (542 aa)
     
  0.743
Solyc09g065010.2.1
Uncharacterized protein (624 aa)
     
  0.743
Solyc08g081280.2.1
Uncharacterized protein (419 aa)
     
 
  0.695
Solyc02g044050.1.1
Uncharacterized protein (491 aa)
     
    0.639
Solyc12g037940.1.1
Uncharacterized protein (136 aa)
     
    0.631
Solyc12g035950.1.1
Uncharacterized protein (51 aa)
     
    0.631
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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