• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc09g005530.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g005530.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g005530.2.1annotation not available (85 aa)    
Predicted Functional Partners:
101266745
annotation not available (351 aa)
   
 
  0.572
101245644
Protein of unknown function (DUF616) (477 aa)
           
  0.570
101246191
Protein of unknown function (DUF616) (499 aa)
     
   
  0.560
101266589
annotation not available (713 aa)
           
  0.497
Solyc09g005810.2.1
annotation not available (113 aa)
   
          0.448
Solyc01g066700.2.1
annotation not available (163 aa)
   
          0.446
Solyc09g005470.2.1
annotation not available (74 aa)
   
          0.431
Solyc10g086750.1.1
annotation not available (160 aa)
           
  0.412
Solyc10g086740.1.1
annotation not available (346 aa)
           
  0.412
Solyc09g011820.2.1
annotation not available (508 aa)
           
  0.412
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (10%) [HD]