STRINGSTRING
Solyc09g005700.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g005700.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g005700.2.1Uncharacterized protein (363 aa)    
Predicted Functional Partners:
Solyc06g073280.2.1
Uncharacterized protein (461 aa)
 
 
  0.973
Solyc11g044840.1.1
Uncharacterized protein (436 aa)
 
   
  0.971
Solyc01g109850.2.1
Uncharacterized protein (480 aa)
   
 
  0.969
Solyc06g075340.2.1
Uncharacterized protein (1195 aa)
       
  0.889
Solyc11g040390.1.1
Uncharacterized protein (819 aa)
       
  0.774
Solyc06g064550.2.1
Uncharacterized protein (919 aa)
       
  0.774
Solyc03g044660.2.1
Uncharacterized protein (357 aa)
 
   
  0.705
Solyc03g083440.2.1
Uncharacterized protein (2226 aa)
         
  0.701
ODC
Ornithine decarboxylase (431 aa)
   
 
  0.699
Solyc03g098310.1.1
Uncharacterized protein (397 aa)
   
 
  0.699
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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