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STRINGSTRING
101245980 protein (Solanum lycopersicum) - STRING interaction network
"101245980" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101245980annotation not available (354 aa)    
Predicted Functional Partners:
Solyc03g119200.2.1
annotation not available (449 aa)
           
  0.581
Solyc03g118870.2.1
annotation not available (637 aa)
           
  0.581
101245369
SNARE associated Golgi protein family (333 aa)
           
  0.557
101266671
Uncharacterized protein; Sequence-specific DNA binding transcription factors (343 aa)
           
  0.538
101266406
CRS1 / YhbY (CRM) domain-containing protein (820 aa)
     
   
  0.509
101255849
Unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- chloroplast outer membrane, chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN- 24 plant structures; EXPRESS /.../ING- 13 growth stages; Has 29 Blast hits to 29 proteins in 12 species- Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (138 aa)
           
  0.502
101263916
Unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- chloroplast; EXPRESSED IN- 23 plant structures; EXPRESSED DURING- 16 growth stages; Has 20 Blast hits to 20 proteins in 11 species- Archa /.../ Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (72 aa)
           
  0.489
101252876
Unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- chloroplast; EXPRESSED IN- 22 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- Protein of unknown functi /.../2301, transmembrane (InterPro-IPR019275); Has 140 Blast hits to 140 proteins in 72 species- Archae - 0; Bacteria - 86; Metazoa - 10; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 3 (source- NCBI BLink) (291 aa)
   
     
  0.466
101252547
annotation not available (374 aa)
           
  0.459
101260659
Unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- photorespiration; LOCATED IN- mitochondrion, mitochondrial membrane, mitochondrial respiratory chain complex I, respiratory chain complex I, membrane; EXPRESSED IN- 25 plant str /.../s; EXPRESSED DURING- 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source- NCBI BLink) (102 aa)
           
  0.459
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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