STRINGSTRING
Solyc09g005740.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc09g005740.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc09g005740.1.1Uncharacterized protein (354 aa)    
Predicted Functional Partners:
Solyc02g062350.2.1
Uncharacterized protein (270 aa)
   
        0.515
Solyc11g006060.1.1
Uncharacterized protein (451 aa)
   
          0.513
Solyc03g098110.2.1
Uncharacterized protein (385 aa)
   
          0.511
Solyc05g013480.2.1
Uncharacterized protein (353 aa)
   
          0.509
Solyc10g006520.2.1
Uncharacterized protein (204 aa)
   
          0.506
Solyc06g084470.2.1
Uncharacterized protein (172 aa)
   
          0.506
Solyc06g066620.2.1
Uncharacterized protein (147 aa)
   
          0.503
Solyc03g007830.2.1
Uncharacterized protein (177 aa)
   
          0.502
Solyc11g065740.1.1
Uncharacterized protein (213 aa)
   
          0.499
Solyc05g051770.2.1
Uncharacterized protein (246 aa)
   
          0.499
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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